Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm24891-201ENSMUST00000104391 136 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm12345-201ENSMUST00000119288 898 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm13916-201ENSMUST00000117368 628 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm8737-201ENSMUST00000122208 642 ntBASIC10.32□□□□□ -0.76
Chd6A3KFM7 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd6A3KFM7 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.31□□□□□ -0.76
Chd6A3KFM7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm2445-201ENSMUST00000182798 989 ntBASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm27530-201ENSMUST00000184096 98 ntBASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.31□□□□□ -0.76
Chd6A3KFM7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm17070-201ENSMUST00000170463 784 ntBASIC10.31□□□□□ -0.76
Chd6A3KFM7 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd6A3KFM7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms