Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm13616-201ENSMUST00000120600 222 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm5354-201ENSMUST00000182417 973 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm29667-201ENSMUST00000190817 490 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav12d-1A0N8R0 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm23935-201ENSMUST00000102303 57 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm24270-201ENSMUST00000102326 57 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm24245-201ENSMUST00000157318 57 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm28760-201ENSMUST00000185995 736 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm19184-201ENSMUST00000196798 928 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Daam2-202ENSMUST00000224595 1926 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms