Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm5493S4R2D1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm9727-201ENSMUST00000161387 555 ntBASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm5425-201ENSMUST00000214125 459 ntBASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm16476-201ENSMUST00000221544 139 ntBASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.9□□□□□ -0.66
Gm5493S4R2D1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.9□□□□□ -0.66
Gm5493S4R2D1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Gm5493S4R2D1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Mir3113-201ENSMUST00000175478 76 ntBASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Gm17971-201ENSMUST00000190239 806 ntBASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.89□□□□□ -0.67
Gm5493S4R2D1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm5493S4R2D1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms