Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm24196-201ENSMUST00000179161 110 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm37497-201ENSMUST00000195830 798 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.9□□□□□ -0.35
H2afb2S4R1M3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
H2afb2S4R1M3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
H2afb2S4R1M3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm13813-201ENSMUST00000120998 787 ntBASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm2231-201ENSMUST00000125661 612 ntBASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb2S4R1M3 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Gm11478-201ENSMUST00000117851 599 ntBASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Gm16479-201ENSMUST00000121706 932 ntBASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Gm22331-201ENSMUST00000158066 136 ntBASIC12.88□□□□□ -0.35
H2afb2S4R1M3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb2S4R1M3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms