Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gm12291-201ENSMUST00000121627 311 ntBASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.08□□□□□ -0.48
Cldn6Q9Z262 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gm5035-201ENSMUST00000215581 927 ntBASIC12.08□□□□□ -0.48
Cldn6Q9Z262 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn6Q9Z262 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm16479-201ENSMUST00000121706 932 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm22331-201ENSMUST00000158066 136 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm27839-201ENSMUST00000184242 106 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn6Q9Z262 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gm11478-201ENSMUST00000117851 599 ntBASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gm13813-201ENSMUST00000120998 787 ntBASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gm2231-201ENSMUST00000125661 612 ntBASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn6Q9Z262 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms