Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldn9Q9Z0S7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm12291-201ENSMUST00000121627 311 ntBASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm13123-201ENSMUST00000122173 492 ntBASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cldn9Q9Z0S7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cldn9Q9Z0S7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gm12138-201ENSMUST00000122180 951 ntBASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gm9002-201ENSMUST00000178437 499 ntBASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cldn9Q9Z0S7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cldn9Q9Z0S7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms