Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Gm31256-201ENSMUST00000194705 506 ntBASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcb1Q9Z0H3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Mir877-201ENSMUST00000104738 85 ntBASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcb1Q9Z0H3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms