Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm29649-201ENSMUST00000185649 419 ntBASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.44□□□□□ -0.1
AmfrQ9R049 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.44□□□□□ -0.1
AmfrQ9R049 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.44□□□□□ -0.1
AmfrQ9R049 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
AmfrQ9R049 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AmfrQ9R049 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AmfrQ9R049 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.43□□□□□ -0.1
AmfrQ9R049 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Gm14127-201ENSMUST00000117906 678 ntBASIC14.43□□□□□ -0.1
AmfrQ9R049 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Gm15824-201ENSMUST00000119516 955 ntBASIC14.43□□□□□ -0.1
AmfrQ9R049 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.43□□□□□ -0.1
AmfrQ9R049 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.43□□□□□ -0.1
AmfrQ9R049 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AmfrQ9R049 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
AmfrQ9R049 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Gm8810-201ENSMUST00000172895 754 ntBASIC14.42□□□□□ -0.1
AmfrQ9R049 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.42□□□□□ -0.1
AmfrQ9R049 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.42□□□□□ -0.1
AmfrQ9R049 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AmfrQ9R049 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms