Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim39Q9ESN2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm26464-201ENSMUST00000157094 305 ntBASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim39Q9ESN2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm7488-201ENSMUST00000117148 684 ntBASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm5161-201ENSMUST00000075243 853 ntBASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.1□□□□□ -0.47
Trim39Q9ESN2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim39Q9ESN2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms