Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Gm44872-201ENSMUST00000207864 420 ntBASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Gm16372-201ENSMUST00000073088 450 ntBASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lime1Q9EQR5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm14760-201ENSMUST00000121831 999 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm7063-201ENSMUST00000186840 981 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm5867-201ENSMUST00000063197 592 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lime1Q9EQR5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Mir7023-201ENSMUST00000185093 64 ntBASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.18□□□□□ -0.62
Lime1Q9EQR5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms