Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne8Q9DC53 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Matn2-203ENSMUST00000226766 3252 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm14704-201ENSMUST00000120300 874 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm13813-201ENSMUST00000120998 787 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm16479-201ENSMUST00000121706 932 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm6244-201ENSMUST00000178732 841 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm10012-201ENSMUST00000078252 192 ntBASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.42□□□□□ -0.26
Cpne8Q9DC53 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Snord83b-201ENSMUST00000104546 94 ntBASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Gm16372-201ENSMUST00000073088 450 ntBASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne8Q9DC53 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms