Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdc40Q9DC48 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Rubie-203ENSMUST00000227803 2430 ntBASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Cdc40Q9DC48 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm1335-201ENSMUST00000121653 386 ntBASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm10156-201ENSMUST00000122364 462 ntBASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm19931-201ENSMUST00000198920 368 ntBASIC12□□□□□ -0.49
Cdc40Q9DC48 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm16372-201ENSMUST00000073088 450 ntBASIC12□□□□□ -0.49
Cdc40Q9DC48 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12□□□□□ -0.49
Cdc40Q9DC48 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm37861-201ENSMUST00000193534 2869 ntBASIC12□□□□□ -0.49
Cdc40Q9DC48 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdc40Q9DC48 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms