Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1aQ9D132 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Map1b-203ENSMUST00000223725 2669 ntBASIC12.21□□□□□ -0.46
Upk1aQ9D132 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk1aQ9D132 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Gm14719-201ENSMUST00000121891 340 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Gm9630-201ENSMUST00000178304 885 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 Mir7684-201ENSMUST00000183858 60 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.2□□□□□ -0.46
Upk1aQ9D132 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk1aQ9D132 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Gm15321-201ENSMUST00000121290 288 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Gm24694-201ENSMUST00000180054 110 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Gm27663-201ENSMUST00000184839 110 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.19□□□□□ -0.46
Upk1aQ9D132 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk1aQ9D132 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms