Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Shmt2Q9CZN7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Shmt2Q9CZN7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Mir1894-201ENSMUST00000122802 81 ntBASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shmt2Q9CZN7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Itm2b-204ENSMUST00000228637 783 ntBASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shmt2Q9CZN7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.31□□□□□ -0.44
Shmt2Q9CZN7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt2Q9CZN7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.31□□□□□ -0.44
Shmt2Q9CZN7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Shmt2Q9CZN7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.31□□□□□ -0.44
Shmt2Q9CZN7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms