Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Gm5279-201ENSMUST00000199575 745 ntBASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim8Q99PJ2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm11524-201ENSMUST00000119349 807 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm27437-201ENSMUST00000183429 107 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm9797-201ENSMUST00000052902 613 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm20445-201ENSMUST00000061905 565 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms