Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd1Q99MH6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gm22189-201ENSMUST00000103822 86 ntBASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gm16215-201ENSMUST00000161990 637 ntBASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Mir7023-201ENSMUST00000185093 64 ntBASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nkd1Q99MH6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkd1Q99MH6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nkd1Q99MH6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkd1Q99MH6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkd1Q99MH6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkd1Q99MH6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkd1Q99MH6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkd1Q99MH6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nkd1Q99MH6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkd1Q99MH6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms