Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Mir7654-201ENSMUST00000185082 70 ntBASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Gm44069-201ENSMUST00000204898 506 ntBASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk5rap3Q99LM2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm15429-201ENSMUST00000151268 798 ntBASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk5rap3Q99LM2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms