Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm22175-201ENSMUST00000175007 78 ntBASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Cttnbp2nlQ99LJ0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm12485-201ENSMUST00000119641 291 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm5161-201ENSMUST00000075243 853 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm24447-201ENSMUST00000083977 338 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.06□□□□□ -0.32
Cttnbp2nlQ99LJ0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cttnbp2nlQ99LJ0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms