Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.77□□□□□ -0.53
Lims1Q99JW4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Mir7654-201ENSMUST00000185082 70 ntBASIC11.76□□□□□ -0.53
Lims1Q99JW4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Gm18307-201ENSMUST00000206864 949 ntBASIC11.76□□□□□ -0.53
Lims1Q99JW4 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.76□□□□□ -0.53
Lims1Q99JW4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lims1Q99JW4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm2423-201ENSMUST00000074863 733 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.75□□□□□ -0.53
Lims1Q99JW4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lims1Q99JW4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.74□□□□□ -0.53
Lims1Q99JW4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.74□□□□□ -0.53
Lims1Q99JW4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms