Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thumpd1Q99J36 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thumpd1Q99J36 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Thumpd1Q99J36 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Thumpd1Q99J36 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm2756-201ENSMUST00000195851 400 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm19184-201ENSMUST00000196798 928 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 AW822252-206ENSMUST00000208904 237 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm7775-201ENSMUST00000218871 853 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm8396-201ENSMUST00000057361 823 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Thumpd1Q99J36 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm14822-201ENSMUST00000122247 291 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm17837-201ENSMUST00000186435 985 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.49□□□□□ -0.57
Thumpd1Q99J36 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms