Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm28450-201ENSMUST00000187349 638 ntBASIC20.08■□□□□ 0.8
Clip1Q922J3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC20.08■□□□□ 0.8
Clip1Q922J3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC20.07■□□□□ 0.8
Clip1Q922J3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Gm13296-201ENSMUST00000117854 997 ntBASIC20.07■□□□□ 0.8
Clip1Q922J3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Gm5863-201ENSMUST00000121760 1008 ntBASIC20.07■□□□□ 0.8
Clip1Q922J3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip1Q922J3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip1Q922J3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC20.06■□□□□ 0.8
Clip1Q922J3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Clip1Q922J3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC20.06■□□□□ 0.8
Clip1Q922J3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC20.06■□□□□ 0.8
Clip1Q922J3 Gm8494-201ENSMUST00000178171 1233 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Gm28882-201ENSMUST00000185504 314 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Gm37666-201ENSMUST00000194110 866 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Gm7003-201ENSMUST00000195089 312 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.06■□□□□ 0.8
Clip1Q922J3 AC166344.1-202ENSMUST00000224139 234 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clip1Q922J3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC20.06■□□□□ 0.8
Clip1Q922J3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip1Q922J3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Gm37986-201ENSMUST00000193285 383 ntBASIC20.05■□□□□ 0.8
Clip1Q922J3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clip1Q922J3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip1Q922J3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Clip1Q922J3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC20.04■□□□□ 0.8
Clip1Q922J3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip1Q922J3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clip1Q922J3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC20.04■□□□□ 0.8
Clip1Q922J3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms