Protein–RNA interactions for Protein: Q91YK2

Rrp1b, Ribosomal RNA processing protein 1 homolog B, mousemouse

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1bQ91YK2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Gm44344-201ENSMUST00000200287 129 ntBASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.67□□□□□ -0.22
Rrp1bQ91YK2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Gm14701-201ENSMUST00000117156 348 ntBASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.66□□□□□ -0.22
Rrp1bQ91YK2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rrp1bQ91YK2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm15376-201ENSMUST00000122258 783 ntBASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm27680-201ENSMUST00000184192 160 ntBASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm19184-201ENSMUST00000196798 928 ntBASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.64□□□□□ -0.23
Rrp1bQ91YK2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms