Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb13Q91Y06 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb13Q91Y06 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Gm8805-201ENSMUST00000117848 313 ntBASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Gm13123-201ENSMUST00000122173 492 ntBASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb13Q91Y06 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm11803-201ENSMUST00000119966 444 ntBASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Mir1894-201ENSMUST00000122802 81 ntBASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm10012-201ENSMUST00000078252 192 ntBASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm5356-201ENSMUST00000093326 615 ntBASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb13Q91Y06 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb13Q91Y06 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms