Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb20Q91XZ9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm25507-201ENSMUST00000116981 144 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm15933-201ENSMUST00000117215 616 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12403-201ENSMUST00000121384 959 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm5251-201ENSMUST00000188959 472 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm43093-201ENSMUST00000202439 1213 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm2691-201ENSMUST00000203205 901 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm7443-201ENSMUST00000206355 378 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 AC142113.2-201ENSMUST00000217425 748 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 AC154843.1-201ENSMUST00000226897 1138 ntBASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb20Q91XZ9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb20Q91XZ9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb20Q91XZ9 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms