Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Itm2b-204ENSMUST00000228637 783 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga3Q91XY5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.56
Pcdhga3Q91XY5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gm14928-201ENSMUST00000120198 477 ntBASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gm23984-201ENSMUST00000157139 203 ntBASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gm28911-201ENSMUST00000188837 117 ntBASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga3Q91XY5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms