Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.83□□□□□ -0.04
Ddx41Q91VN6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Mir686-201ENSMUST00000102174 109 ntBASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Gm25261-201ENSMUST00000157416 134 ntBASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx41Q91VN6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Gm16202-201ENSMUST00000117532 544 ntBASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx41Q91VN6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Gm25927-201ENSMUST00000175058 117 ntBASIC14.8□□□□□ -0.04
Ddx41Q91VN6 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx41Q91VN6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms