Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm16215-201ENSMUST00000161990 637 ntBASIC13.34□□□□□ -0.27
Trim60Q8VI40 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm44069-201ENSMUST00000204898 506 ntBASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.34□□□□□ -0.27
Trim60Q8VI40 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim60Q8VI40 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim60Q8VI40 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim60Q8VI40 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim60Q8VI40 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim60Q8VI40 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Trim60Q8VI40 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim60Q8VI40 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim60Q8VI40 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Gm14350-201ENSMUST00000116642 640 ntBASIC13.33□□□□□ -0.28
Trim60Q8VI40 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.33□□□□□ -0.28
Trim60Q8VI40 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trim60Q8VI40 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim60Q8VI40 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms