Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rprd1aQ8VDS4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm37042-201ENSMUST00000193816 581 ntBASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rprd1aQ8VDS4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gm12363-201ENSMUST00000122250 668 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gm27514-201ENSMUST00000183692 110 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gm4768-201ENSMUST00000206199 686 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rprd1aQ8VDS4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rprd1aQ8VDS4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms