Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm11637-201ENSMUST00000120601 592 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm16379-201ENSMUST00000161469 348 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm27501-201ENSMUST00000183599 107 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm27516-201ENSMUST00000184237 98 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm8762-201ENSMUST00000193486 339 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm45930-201ENSMUST00000221330 292 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm19163-201ENSMUST00000223313 780 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ndc1Q8VCB1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Mir8109-201ENSMUST00000184375 117 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.18□□□□□ -0.46
Ndc1Q8VCB1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ndc1Q8VCB1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms