Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps39Q8R5L3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Mir686-201ENSMUST00000102174 109 ntBASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps39Q8R5L3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm27701-201ENSMUST00000184498 110 ntBASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm2495-201ENSMUST00000191160 466 ntBASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm18018-201ENSMUST00000198273 408 ntBASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps39Q8R5L3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms