Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdt1Q8R4E9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm18753-201ENSMUST00000201000 566 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm3786-201ENSMUST00000202659 378 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdt1Q8R4E9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdt1Q8R4E9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Mir5132-201ENSMUST00000175166 71 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm38341-201ENSMUST00000195357 515 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm9368-201ENSMUST00000219348 831 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms