Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim29Q8R2Q0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Trim29Q8R2Q0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim29Q8R2Q0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim29Q8R2Q0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim29Q8R2Q0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim29Q8R2Q0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm11803-201ENSMUST00000119966 444 ntBASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm8810-201ENSMUST00000172895 754 ntBASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Trim29Q8R2Q0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Gm13123-201ENSMUST00000122173 492 ntBASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim29Q8R2Q0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms