Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Mir7221-201ENSMUST00000184009 72 ntBASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm42612-201ENSMUST00000197986 623 ntBASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm43170-201ENSMUST00000199827 612 ntBASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm44985-201ENSMUST00000206202 1016 ntBASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12□□□□□ -0.49
H2afjQ8R1M2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12□□□□□ -0.49
H2afjQ8R1M2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12□□□□□ -0.49
H2afjQ8R1M2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
H2afjQ8R1M2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afjQ8R1M2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm15371-201ENSMUST00000117057 784 ntBASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm38223-201ENSMUST00000194484 695 ntBASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.99□□□□□ -0.49
H2afjQ8R1M2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afjQ8R1M2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Gm15376-201ENSMUST00000122258 783 ntBASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Gm19931-201ENSMUST00000198920 368 ntBASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Gm7730-201ENSMUST00000212486 454 ntBASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms