Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Shtn1Q8K2Q9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shtn1Q8K2Q9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Gm9555-201ENSMUST00000200908 583 ntBASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shtn1Q8K2Q9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm24749-201ENSMUST00000157838 343 ntBASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm45770-201ENSMUST00000212105 616 ntBASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shtn1Q8K2Q9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gm13611-201ENSMUST00000118269 318 ntBASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gm8566-201ENSMUST00000120174 465 ntBASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gzmn-202ENSMUST00000225535 989 ntBASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms