Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.01□□□□□ -0.33
Clip4Q8CI96 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.01□□□□□ -0.33
Clip4Q8CI96 Gm26315-201ENSMUST00000083890 321 ntBASIC13.01□□□□□ -0.33
Clip4Q8CI96 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Clip4Q8CI96 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clip4Q8CI96 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Gm15222-202ENSMUST00000228667 1726 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Clip4Q8CI96 Gm9755-201ENSMUST00000032981 1356 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Clip4Q8CI96 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Gm4984-201ENSMUST00000115987 360 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Gm5303-201ENSMUST00000117943 1252 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13□□□□□ -0.33
Clip4Q8CI96 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13□□□□□ -0.33
Clip4Q8CI96 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clip4Q8CI96 Gm8652-201ENSMUST00000181363 964 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Gm6266-201ENSMUST00000203844 806 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13□□□□□ -0.33
Clip4Q8CI96 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Itm2b-204ENSMUST00000228637 783 ntBASIC13□□□□□ -0.33
Clip4Q8CI96 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clip4Q8CI96 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clip4Q8CI96 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clip4Q8CI96 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13□□□□□ -0.33
Clip4Q8CI96 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clip4Q8CI96 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Gm5687-201ENSMUST00000118252 640 ntBASIC12.99□□□□□ -0.33
Clip4Q8CI96 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clip4Q8CI96 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms