Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Gm15236-201ENSMUST00000117309 379 ntBASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Gm11531-201ENSMUST00000117614 555 ntBASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Gm13736-201ENSMUST00000119272 253 ntBASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.66■□□□□ 0.26
Rab11fip3Q8CHD8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip3Q8CHD8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Rab11fip3Q8CHD8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip3Q8CHD8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip3Q8CHD8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip3Q8CHD8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.63■□□□□ 0.25
Rab11fip3Q8CHD8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip3Q8CHD8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip3Q8CHD8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip3Q8CHD8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms