Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox30Q8CGW4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox30Q8CGW4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox30Q8CGW4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox30Q8CGW4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.07□□□□□ -0.16
Sox30Q8CGW4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Gm12384-201ENSMUST00000119228 919 ntBASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox30Q8CGW4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Snord83b-201ENSMUST00000104546 94 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Gm14704-201ENSMUST00000120300 874 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Gm42599-201ENSMUST00000201308 469 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Rubie-203ENSMUST00000227803 2430 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox30Q8CGW4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Gm16296-201ENSMUST00000159905 325 ntBASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Gm44872-201ENSMUST00000207864 420 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms