Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc38Q8CDN8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Gm18018-201ENSMUST00000198273 408 ntBASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc38Q8CDN8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Gm28911-201ENSMUST00000188837 117 ntBASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc38Q8CDN8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gm28693-202ENSMUST00000190758 331 ntBASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gm6458-201ENSMUST00000211573 635 ntBASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms