Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Lrif1Q8CDD9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lrif1Q8CDD9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Gm24420-201ENSMUST00000176676 59 ntBASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrif1Q8CDD9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.75□□□□□ -0.37
Lrif1Q8CDD9 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms