Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Mmp14-206ENSMUST00000225641 3238 ntBASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pabpn1Q8CCS6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Gm12579-201ENSMUST00000118040 783 ntBASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Gm10169-201ENSMUST00000121822 348 ntBASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Gm15889-202ENSMUST00000212669 2443 ntBASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pabpn1Q8CCS6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm12856-201ENSMUST00000119471 1293 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm18367-201ENSMUST00000176139 600 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm43969-201ENSMUST00000204833 535 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pabpn1Q8CCS6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm12906-201ENSMUST00000154610 441 ntBASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm36982-201ENSMUST00000193796 1128 ntBASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 AC154436.1-201ENSMUST00000227272 782 ntBASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pabpn1Q8CCS6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pabpn1Q8CCS6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pabpn1Q8CCS6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pabpn1Q8CCS6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pabpn1Q8CCS6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm24943-201ENSMUST00000158329 433 ntBASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm16167-201ENSMUST00000160428 1065 ntBASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm8756-201ENSMUST00000183250 929 ntBASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pabpn1Q8CCS6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms