Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm26315-201ENSMUST00000083890 321 ntBASIC12.51□□□□□ -0.41
SynpoQ8CC35 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm8810-201ENSMUST00000172895 754 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm5370-201ENSMUST00000187187 574 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm29608-201ENSMUST00000190444 463 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm8598-201ENSMUST00000221184 836 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.5□□□□□ -0.41
SynpoQ8CC35 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SynpoQ8CC35 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm10156-201ENSMUST00000122364 462 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 Proscos-202ENSMUST00000178990 666 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm42693-201ENSMUST00000196779 631 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.49□□□□□ -0.41
SynpoQ8CC35 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SynpoQ8CC35 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms