Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm26185-201ENSMUST00000157692 266 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm17208-201ENSMUST00000168388 535 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm4271-201ENSMUST00000174444 973 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trub1Q8C0D0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm22121-201ENSMUST00000175148 54 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.29□□□□□ -0.28
Trub1Q8C0D0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.29□□□□□ -0.28
Trub1Q8C0D0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Snord83b-201ENSMUST00000104546 94 ntBASIC13.28□□□□□ -0.28
Trub1Q8C0D0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms