Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm15236-201ENSMUST00000117309 379 ntBASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm25668-201ENSMUST00000157700 129 ntBASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Daam2-202ENSMUST00000224595 1926 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm14726-201ENSMUST00000120623 896 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm2546-201ENSMUST00000182630 991 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf2Q8BZT2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Mir339-201ENSMUST00000083659 96 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf2Q8BZT2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms