Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lrtm1Q8BXQ3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lrtm1Q8BXQ3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lrtm1Q8BXQ3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm12384-201ENSMUST00000119228 919 ntBASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm25261-201ENSMUST00000157416 134 ntBASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrtm1Q8BXQ3 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Lrtm1Q8BXQ3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Gm17208-201ENSMUST00000168388 535 ntBASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Gm19163-201ENSMUST00000223313 780 ntBASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Snora73a-201ENSMUST00000082453 205 ntBASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrtm1Q8BXQ3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrtm1Q8BXQ3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.26□□□□□ -0.61
Lrtm1Q8BXQ3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrtm1Q8BXQ3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrtm1Q8BXQ3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrtm1Q8BXQ3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms