Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpne3Q8BT60 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm6983-201ENSMUST00000214912 628 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm2423-201ENSMUST00000074863 733 ntBASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpne3Q8BT60 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gm12859-201ENSMUST00000117834 427 ntBASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gm10576-201ENSMUST00000191927 825 ntBASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Gm18624-201ENSMUST00000220966 658 ntBASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpne3Q8BT60 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cpne3Q8BT60 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms