Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm14219-201ENSMUST00000120414 288 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm6855-201ENSMUST00000206307 790 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm17831-201ENSMUST00000205579 900 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm18059-201ENSMUST00000208073 580 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm23363-201ENSMUST00000175024 79 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smg1Q8BKX6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Ighv1-86-201ENSMUST00000200562 353 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm45925-201ENSMUST00000218882 744 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm8723-201ENSMUST00000166076 820 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm8701-201ENSMUST00000169259 874 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm270-201ENSMUST00000223010 976 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm27910-201ENSMUST00000185004 107 ntBASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smg1Q8BKX6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms