Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Csnk1a1Q8BK63 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Csnk1a1Q8BK63 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Csnk1a1Q8BK63 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.5□□□□□ -0.57
Csnk1a1Q8BK63 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Gm24196-201ENSMUST00000179161 110 ntBASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Gm5035-201ENSMUST00000215581 927 ntBASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Csnk1a1Q8BK63 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Mir686-201ENSMUST00000102174 109 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm12203-201ENSMUST00000118235 598 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm12209-201ENSMUST00000120089 596 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm13123-201ENSMUST00000122173 492 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm27847-201ENSMUST00000183711 107 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm27375-201ENSMUST00000183799 107 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Csnk1a1Q8BK63 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Csnk1a1Q8BK63 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Csnk1a1Q8BK63 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Csnk1a1Q8BK63 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Csnk1a1Q8BK63 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms