Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc40Q8BI79 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc40Q8BI79 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc40Q8BI79 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Gm15429-201ENSMUST00000151268 798 ntBASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Gm19931-201ENSMUST00000198920 368 ntBASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc40Q8BI79 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc40Q8BI79 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm18018-201ENSMUST00000198273 408 ntBASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms