Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Gm6007-201ENSMUST00000208170 823 ntBASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.05□□□□□ -0.16
Depdc1bQ8BH88 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Depdc1bQ8BH88 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Depdc1bQ8BH88 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Depdc1bQ8BH88 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Gm8062-201ENSMUST00000139696 444 ntBASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Gm17420-201ENSMUST00000164753 153 ntBASIC14.02□□□□□ -0.17
Depdc1bQ8BH88 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms