Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ccdc116Q80X53 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ccdc116Q80X53 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.65□□□□□ -0.39
Ccdc116Q80X53 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Gm11618-201ENSMUST00000117946 267 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Gm16372-201ENSMUST00000073088 450 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc116Q80X53 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Gm8805-201ENSMUST00000117848 313 ntBASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Gm8810-201ENSMUST00000172895 754 ntBASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Gm22119-201ENSMUST00000175594 99 ntBASIC12.63□□□□□ -0.39
Ccdc116Q80X53 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc116Q80X53 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Gm11918-201ENSMUST00000121660 179 ntBASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc116Q80X53 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms